Bruker Daltonics BioTools 3.1
As a central component in the proteomics-related hardware and software suite from Bruker Daltonics, BioTools™ provides an unprecedented support to mass spectrometry-based proteomics and protein analysis. BioTools is designed for the interpretation ...
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Proteomics Download
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2IDEAL-Q 1.0
IDEAL-Q is an automated analysis tool for label-free quantitative proteomics. It accepts generic input format including mzXML raw data format and Mascot, SEQUEST, PeptideProphet/ProteinProphet for search result. IDEAL-Q uses an algorithm, called IDEAL ...Freeware -
3GeneSpringGX 12.0
Agilent's GeneSpring GX software provides powerful, accessible statistical tools for fast visualization and analysis of transcriptomics, genomics, proteomics and metabolomics data. Designed specifically for the needs of biologists, GeneSpring GX ...$299.00 -
4saint apms 2.3
Saint APMS is a software for assigning confidence scores to protein-protein interactions based on quantitative proteomics data in AP-MS experiments. This free software application is used for spectral count data in the yeast kinase interactome work not ...Freeware -
5Scaffold 3 3.0
Scaffold - Visualize and Validate Complex MS/MS Proteomics Experiments View supporting data. Check statistical probabilities. Verify that statistics are valid for your data. Tie protein identifications to key biological annotations. Meet journal standards$5,995.00 -
6ProteinLynx Global Server 2.5
ProteinLynx Global SERVER (PLGS) is a fully integrated Mass-Informatics platform for quantitative and qualitative proteomics research. It is the central analytical platform for Waters proteomics systems. PLGS is based on open/pluggable system architecture, ...$345.00 -
7GenePattern 3.3
GenePattern is a powerful genomic analysis platform that provides access to more than 180 tools for gene expression analysis, proteomics, SNP analysis, flow cytometry, RNA-seq analysis, and common data processing tasks. A web-based interface provides ...Freeware -
8Insilicos Viewer 1.5
Insilicos Viewer is a free viewer for mass spectrometry proteomics data, such as from MudPIT-type experiments. A new and easy to use software that you can get it for free on your computers. This viewer can read mzXML, a mass spectrometry data format ...Freeware -
9Pattern Lab for Proteomics 1.0
-YADA can deisotope and decharge highly charged peptides and assign monoisotopic precursor masses to MS2's turning it suitable especialy for middle down proteomics. -
10pIcarver 3.1
This tool has been developed as a service of the Bioinformatics Core Facility, within a collaboration between the Proteome Informatics Group from the Swiss Institute of Bioinformatics (SIB) and the Biomedical Proteomics Research GroupFreeware -
11Mascot Daemon 2.3
Mascot Daemon is a client application which automates the submission of data files to Mascot server. It runs under Microsoft Windows 2000, XP, Server 2003, Vista, Server 2008, and 7. Multiple Daemon clients can submit searches to a single Mascot server.Freeware -
12Bruker TopSpin 3.0
TopSpin is a software package for acquisition, processing and analyzing NMR data, streamlined for your convenience. TopSpin was designed for Windows and Linux users with a highly intuitive interface utilizing the most widespread standards familiar from ...$139.16 -
13Lipid Data Analyzer 1.5
The accurate measurement of the lipidome permits insights into physiological and pathological processes. Of the present high-throughput technologies, LC-MS especially bears potential of monitoring quantitative changes in hundreds of lipids simultaneously. -
14PathwayStudio 7.0
Pathway Studio software provides a desktop graphical user interface with capability to dynamically create and draw protein interaction networks and pathways using your data based upon information from the literature. All interactions shown by Pathway ... -
15DECODON Delta2D 4.2
Delta2D combines fast visual analysis, exceptionally reliable spot matching and quantitation as well as versatile tools for sorting, filtering and annotating spot data in one easy to learn application. With Delta2D's unique combination of powerful ... -
16Cytoscape x64 3.0.0
Cytoscape x64 supports many use cases in molecular and systems biology, genomics, and proteomics: Load molecular and genetic interaction data sets in many formats Project and integrate global datasets and functional annotations Establish powerful ...Freeware -
17VIPER 3.49 B467 1.0
See also the Open Source Tools for the Accurate Mass and Time (AMT) Tag Proteomics Pipeline poster presented by Navdeep Jaitly at ASMS 2006. This poster presents an overview of VIPER and its interactions with other proteomics software. Lastly, a help ...Freeware